BIOSIG toolbox contains many useful functions for biomedical signal processing
http://biosig.sf.net/
Copyright (C) 2003,2004,2007,2008 by Alois Schloegl <a.schloegl@ieee.org>
WWW: http://biosig.sf.net/
$Id: Contents.m,v 1.8 2008/01/23 22:04:41 schloegl Exp $
This is part of the BIOSIG-toolbox http://biosig.sf.net/
LICENSE:
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
=== INDEX BIOSIG ===
BIOSIG/DOC: Documentation
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header.txt specification of header (Dokumentation)
eventcodes.txt Codes for Events, Markers, Annotations as used in GDF and BioSig
DecimalFactors.txt
units.csv codes for phyiscal dimensions
BIOSIG/demo: [demo's, examples]
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demo1 QRS-detection
demo2 estimates and validates BCI classifier
demo3 demonstrates how the generate an EDF/GDF/BDF file
demo4 Demonstrates how the generate an BKR file
demo5 Demonstrates how the generate an WAV file
demo6 transfer functions of lumped circuit model
demo7 simulations for MVAR estimates
scptest tests loading routine of SCP-ECG data
bench_biosig benchmark test based on BioSig4OctMat
T100: [Data Acquistion]
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BIOSIG/T200: Data Formats
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SOPEN opens biosig data and reads header information
SREAD reads biosig data
SCLOSE closes biosig file
SWRITE writes biosig data (currently only BKR, EDF, BDF implemented)
SSEEK set file positon indicator
STELL returns file position indicator
SEOF checks for end-of-file
SREWIND sets file pointer to the start
SLOAD Opens, reads all data and closes file Biosig files.
TLOAD triggered loading of data
and some utility functions
BIOSIG/T250: Quality Control and Artifact Processing
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ARTIFACT_SELECTION converts artifact scorings into trial selections
EEG2HIST calculates histogram
GETTRIGGER gets trigger points
TRIGG extract fixed-length trials around trigger points
DETECT_MUSCLE detection of muscle artefacts using an inverse filter
REGRESS_EOG reduce EOG artifacts with regression analysis
REMOVE5060HZ methods for removing line interference
BIOSIG/T300: Signal Processing and Feature extraction
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general:
processing general framework for blockwise-dataprocessing
EEG:
BARLOW Barlow parameters
HJORTH Hjorth parameters
WACKERMANN Wackermann parameters
EVOKED_POTENTIAL EP estimation
TFMVAR time-frequency multivariate autoregressive modelling
LUMPED Lumped Circuit model for the EEG alpha rhythm
EMG:
PAYNTER Paynter filter for Amplitude demodulation of EMG
ECG:
QRSDETECT QRS-Detection methods
BERGER resampling of HRV data
HEARTRATEVARIABILITY estimates various HRV parameters
QRScorr correctiong of QRS-detection
ECTBcorr correction of Ectopic beat effect
TVAAR Time-varying AAR estimation
BIOSIG/T310: Wavelet and Fourier Analysis,
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ERD/ERS
PLV
HRV
BIOSIG/T400: Classification, Single Trial Analysis
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DECOVM decomposes an "extended" covariance matrix
TRAIN_SC estimates classifier from labelled data
TEST_SC applies classifier to test data
FINDCLASSIFIER obtains classifier includeding performance test.
XVAL cross-validation procedure
BIOSIG/T450: Statistical analysis, False Discovery Rate (FDR)
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FDR false discovery rate
several utility functions
BIOSIG/T490: Evaluation criteria
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AUC area under the curve
ROC receiver-operator-characteristics
MUTINFO mutual information
QCMAHAL quality check of multiple discriminator
KAPPA kappa statistics
BCI3EVAL Evaluation of BCI results (triggered output)
BCI4EVAL Evaluation of BCI results (continous output)
CRITERIA2005IIIb calculates maximum steepness of mutual information
BIOSIG/T500: Presentation, Output
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PLOTA general plot functions for various data structures
SVIEW simple signal viewer
ELPOS 2-D electrode positions
ELPOS3 3-D electrode positions
BIOSIG/T510: Visualization II
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various functions to display results of T310
BIOSIG/T501: Visualization of EEG Cooupling
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PLOT_COUPLING displays EEG coupling
BIOSIG/T600: Interactive Viewer and Scoring
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SVIEWER Interactive Viewer and Scoring
VIEWEDF EDF-Viewer
TSA: Time Series Analysis
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NaN: Statistical Toolbox for data with missing Samples
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